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Bacillus licheniformis 1

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Genomic variations in the counterpart normal controls of lung squamous cell carcinomas

Dalin Zhang, Liwei Qu, Bo Zhou, Guizhen Wang, Guangbiao Zhou

Frontiers of Medicine 2018, Volume 12, Issue 3,   Pages 280-288 doi: 10.1007/s11684-017-0580-1

Abstract: However, few studies have investigated the genomic variations that occur only in normal tissues thatWe then called genomic variations specific to the normal lung tissues through filtering the genomic sequenceSixteen genomic variations were called in the three normal lung tissues.These variations were confirmed by Sanger capillary sequencing.Our results uncovered previously unreported genomic variations in CNCs, rather than LUSCs, that may be

Keywords： lung cancer     counterpart normal control     genomic variations    

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Statistical considerations for genomic selection

Huimin KANG, Lei ZHOU, Jianfeng LIU

Frontiers of Agricultural Science and Engineering 2017, Volume 4, Issue 3,   Pages 268-278 doi: 10.15302/J-FASE-2017164

Abstract: Genomic selection is becoming increasingly important in animal and plant breeding, and is attractingthe most commonly used statistical methods and some extensions of them, i.e., ridge regression and genomicIn simulation studies where true breeding values are available, accuracy of genomic estimated breedingFactors influencing the accuracy of genomic selection include linkage disequilibrium between markersGenomic selection has been implemented in the breeding programs of dairy cattle, beef cattle, pigs and

Keywords： genomic estimated breeding value     genomic selection     linkage disequilibrium     statistical methods    

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Effects of sulfur on variations in the chemical speciation of heavy metals from fly ash glass

Frontiers of Environmental Science & Engineering 2023, Volume 17, Issue 10, doi: 10.1007/s11783-023-1728-7

Abstract:

● A higher sulfur content reduced the curing rate of Cr in glass.

Keywords： Dechlorinated fly ash     SO3     Heavy metal     Chemical speciation     Glass solidification    

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Seasonal and treatment-process variations in invertebrates in drinking water treatment plants

Zhiling Wu, Xianchun Tang, Hongbin Chen

Frontiers of Environmental Science & Engineering 2021, Volume 15, Issue 4, doi: 10.1007/s11783-020-1354-6

Abstract: Abstract • Seasonal and treatment-process variations in invertebrates in a DWTP were analyzed. • Thedrinking water treatment plant between May 2015 and April 2016 and analyzed seasonal and treatment-process variations

Keywords： Invertebrates     Drinking water     Seasonal variations     Treatment process    

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Bioaerosol emissions variations in large-scale landfill region and their health risk impacts

Frontiers of Environmental Science & Engineering 2022, Volume 16, Issue 12, doi: 10.1007/s11783-022-1593-9

Abstract:

● The airborne bacteria in landfills were 4–50 times higher than fungi.

Keywords： Microbial aerosols     Landfill sites     Health risk assessment     CALPUFF    

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GLOBAL GENOMIC PREDICTION IN HORTICULTURAL CROPS: PROMISES, PROGRESS, CHALLENGES AND OUTLOOK

Frontiers of Agricultural Science and Engineering 2021, Volume 8, Issue 2,

Abstract:

Horticultural crops are a major source of high value nutritious food, and new improved cultivars developed through breeding are required for sustainable production in the face of abiotic and biotic stresses, and to deliver novel, premium products to consumers. However, grower confidence in the performance of new germplasm, particularly across environmental variability, is important for commercial adoption and germplasm-environment matching to optimize production.

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Investigations on color variations of Morpho rhetenor butterfly wing scales

Guanglan LIAO, Haibo ZUO, Xuan JIANG, Xuefeng YANG, Tielin SHI

Frontiers of Mechanical Engineering 2012, Volume 7, Issue 4,   Pages 394-400 doi: 10.1007/s11465-012-0347-y

Abstract:

Experiments and simulations are carried out to investigate the optical properties of butterfly wing scales. The upper surface of a male butterfly wing presents a single-layer of scales, the microstructures of which are responsible for the brilliant blue color. The color varies from cyan blue to yellow green and soon afterwards returns back to cyan blue when some ethanol is dropped on the upper surface. At the start of the ethanol volatilization process, the reflection spectrum remains stable. As the ethanol further volatilizes, the peak reflectance decreases slightly, then increases dramatically. Meanwhile, the peak wavelength keeps approximately constant, then decreases, and keeps almost stable at the end of the process. Therefore, the optical properties depend strongly on the varying ambient conditions, including the refractive index and the thickness of the packing medium. Moreover, the possible causes for the scales in dark green region after several dropping ethanol experiments are clarified. This research benefits our understanding of the color variation mechanisms of the wing scales, and provides inspiration for further studies and applications.

Keywords： Morpho rhetenor     microstructures     color variations     ambient medium    

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GLOBAL GENOMIC PREDICTION IN HORTICULTURAL CROPS: PROMISES, PROGRESS, CHALLENGES AND OUTLOOK

Craig HARDNER, Satish KUMAR, Dorrie MAIN, Cameron PEACE

Frontiers of Agricultural Science and Engineering   Pages 353-355 doi: 10.15302/J-FASE-2021387

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Topological reorganization and functional alteration of distinct genomic components in gallbladder cancer

Frontiers of Medicine doi: 10.1007/s11684-023-1008-8

Abstract: Altered three-dimensional architecture of chromatin influences various genomic regulators and subsequentHowever, knowledge of the topological rearrangement of genomic hierarchical layers in cancer is largely

Keywords： 3D genome     cancer     TADs     loop     gene regulation    

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Seasonal variations of transport pathways andpotential sources of PM

Yuan Chen, Shaodong Xie, Bin Luo

Frontiers of Environmental Science & Engineering 2018, Volume 12, Issue 1, doi: 10.1007/s11783-018-1009-z

Abstract: Seasonal pattern of transport pathways and potential sourcesof PM in Chengdu during 2012–2013were investigated based on hourly PM data,backward trajectories, clustering analysis, potential source contributionfunction (PSCF), and concentration-weighted trajectory (CWT) method.The annual hourly mean PM concentrationin Chengdu was 97.4 mg·m . 5, 5, 5 and 3 mean clusters were generatedin four seasons, respectively. Short-distance air masses, which travelledwithin the Sichuan Basin with no specific source direction and relativelyhigh PM loadings (>80 mg·m ) appearedas important pathways in all seasons. These short pathways indicatedthat emissions from both local and surrounding regions of Chengducontributed significantly to PM pollution.The cities in southern Chengdu were major potential sources with PSCF>0.6and CWT>90 mg·m . The northeastern pathway prevailed throughoutthe year with higher frequency in autumn and winter and lower frequencyin spring and summer. In spring, long-range transport from southernXinjiang was a representative dust invasion path to Chengdu, and theCWT values along the path were 30-60 mg·m . Long-range transportwas also observed in autumn from southeastern Xinjiang along a northwesterlypathway, and in winter from the Tibetan Plateau along a westerly pathway.In summer, the potential source regions of Chengdu were smaller thanthose in other seasons, and no long-range transport pathway was observed.Results of PSCF and CWT indicated that regions in Qinghai and Tibetcontributed to PM pollution in Chengdu aswell, and their CWT values increased to above 30 mg·m in winter.

Keywords： Transport pathway     Backwardtrajectory     Clustering analysis     Potential source     Chengdu    

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Detection of genomic signatures for pig hairlessness using high-density SNP data

Ying SU,Yi LONG,Xinjun LIAO,Huashui AI,Zhiyan ZHANG,Bin YANG,Shijun XIAO,Jianhong TANG,Wenshui XIN,Lusheng HUANG,Jun REN,Nengshui DING

Frontiers of Agricultural Science and Engineering 2014, Volume 1, Issue 4,   Pages 307-313 doi: 10.15302/J-FASE-2014039

Abstract: We conducted a genomic scan for genetically differentiated regions between hairy and hairless pigs usingA total of 38405 SNPs in 498 animals from 36 diverse breeds were used to detect genomic signatures for

Keywords： hairlessness     pig     selective sweeping    

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Spatio-temporal variations of water quality in Yuqiao Reservoir Basin, North China

Yuan XU,Ruqin XIE,Yuqiu WANG,Jian SHA

Frontiers of Environmental Science & Engineering 2015, Volume 9, Issue 4,   Pages 649-664 doi: 10.1007/s11783-014-0702-9

Abstract: the water quality status of Yuqiao Reservoir Basin, North China, for assessing its spatio-temporal variationsTemp, pH, SS, T-har, DO, NO -N and TP were identified as significant variables affecting spatial variations, and Temp, pH and NO -N were identified as significant variables affecting temporal variations by discriminantFactor analysis identified four latent pollution sources for water quality variations: nutrient pollution

Keywords： Fuzzy comprehensive assessment     multivariate statistical analysis     water quality    

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Analysis of the genomic landscape of primary central nervous system lymphoma using whole-genome sequencing

Frontiers of Medicine   Pages 889-906 doi: 10.1007/s11684-023-0994-x

Abstract: Whole-genome sequencing was performed on 68 newly diagnosed Chinese PCNSL samples, whose genomic characteristicsStructural variations were identified in all patients with a mean of 349, which did not significantlyThe high level of copy number variations was significantly associated with poor progression-free survivalCollectively, this study comprehensively reveals the genomic landscape of newly diagnosed Chinese PCNSLs

Keywords： primary central nervous system lymphoma     whole-genome sequencing     TMSB4X     copy number variation     gene mutation    

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Robust design approach to the minimization of functional performance variations of products and systems

J. ZHANG, H. DU, D. XUE, P. GU

Frontiers of Mechanical Engineering 2021, Volume 16, Issue 2,   Pages 379-392 doi: 10.1007/s11465-020-0607-1

Abstract: Functional performance variations of products and systems are often used to measure the qualities ofA robust design approach has been developed in this research to minimize the functional performance variationsconsidering the design parameter uncertainties by identifying the boundaries of the functional performance variationsconfiguration, (2) the optimal values of design parameters, and (3) the boundaries of functional performance variations

Keywords： product design     robust design     design optimization     uncertainties    

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Tumor growth and metastasis can be inhibited by maintaining genomic stability in cancer cells

Yi Liang,Qisheng Feng,Jian Hong,Futuo Feng,Yi Sang,Wenrong Hu,Miao Xu,Roujun Peng,Tiebang Kang,Jinxin Bei,Yixin Zeng

Frontiers of Medicine 2015, Volume 9, Issue 1,   Pages 57-62 doi: 10.1007/s11684-015-0389-8

Abstract: Our previous research demonstrates that SLCCs are inducible by increasing genomic instability in cancerradicals and is used to protect patients from radioactive exposure, was used as an agent that maintains genomicFurthermore, MMC alone enhanced genomic instability, but MMC combined with AET attenuated the extentof genomic instability in primary VX2 tumor tissue.Taken together, our data suggest that the genomic protector AET can inhibit the induction of SLCCs, and

Keywords： rabbit VX2 liver tumor     mitomycin C     AET     stem-like cancer cells     genomic instability    

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Title Author Date Type Operation

Genomic variations in the counterpart normal controls of lung squamous cell carcinomas

Dalin Zhang, Liwei Qu, Bo Zhou, Guizhen Wang, Guangbiao Zhou

Journal Article

Statistical considerations for genomic selection

Huimin KANG, Lei ZHOU, Jianfeng LIU

Journal Article

Effects of sulfur on variations in the chemical speciation of heavy metals from fly ash glass

Journal Article

Seasonal and treatment-process variations in invertebrates in drinking water treatment plants

Zhiling Wu, Xianchun Tang, Hongbin Chen

Journal Article

Bioaerosol emissions variations in large-scale landfill region and their health risk impacts

Journal Article

GLOBAL GENOMIC PREDICTION IN HORTICULTURAL CROPS: PROMISES, PROGRESS, CHALLENGES AND OUTLOOK

Journal Article

Investigations on color variations of Morpho rhetenor butterfly wing scales

Guanglan LIAO, Haibo ZUO, Xuan JIANG, Xuefeng YANG, Tielin SHI

Journal Article

GLOBAL GENOMIC PREDICTION IN HORTICULTURAL CROPS: PROMISES, PROGRESS, CHALLENGES AND OUTLOOK

Craig HARDNER, Satish KUMAR, Dorrie MAIN, Cameron PEACE

Journal Article

Topological reorganization and functional alteration of distinct genomic components in gallbladder cancer

Journal Article

Seasonal variations of transport pathways andpotential sources of PM

Yuan Chen, Shaodong Xie, Bin Luo

Journal Article

Detection of genomic signatures for pig hairlessness using high-density SNP data

Ying SU,Yi LONG,Xinjun LIAO,Huashui AI,Zhiyan ZHANG,Bin YANG,Shijun XIAO,Jianhong TANG,Wenshui XIN,Lusheng HUANG,Jun REN,Nengshui DING

Journal Article

Spatio-temporal variations of water quality in Yuqiao Reservoir Basin, North China

Yuan XU,Ruqin XIE,Yuqiu WANG,Jian SHA

Journal Article

Analysis of the genomic landscape of primary central nervous system lymphoma using whole-genome sequencing

Journal Article

Robust design approach to the minimization of functional performance variations of products and systems

J. ZHANG, H. DU, D. XUE, P. GU

Journal Article

Tumor growth and metastasis can be inhibited by maintaining genomic stability in cancer cells

Yi Liang,Qisheng Feng,Jian Hong,Futuo Feng,Yi Sang,Wenrong Hu,Miao Xu,Roujun Peng,Tiebang Kang,Jinxin Bei,Yixin Zeng

Journal Article